Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc60Q8C4J0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc60Q8C4J0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc60Q8C4J0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Gm11950-201ENSMUST00000121615 838 ntBASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc60Q8C4J0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms