Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rft1Q8C3B8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rft1Q8C3B8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rft1Q8C3B8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rft1Q8C3B8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rft1Q8C3B8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Mir5122-201ENSMUST00000175004 89 ntBASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.72□□□□□ -0.05
Rft1Q8C3B8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms