Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Gm11950-201ENSMUST00000121615 838 ntBASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Gm17808-201ENSMUST00000200859 894 ntBASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp44Q8C2S0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp44Q8C2S0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp44Q8C2S0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp44Q8C2S0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp44Q8C2S0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms