Protein–RNA interactions for Protein: Q8BYH3

Trmt13, tRNA:m(4)X modification enzyme TRM13 homolog, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt13Q8BYH3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trmt13Q8BYH3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trmt13Q8BYH3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Mir5131-201ENSMUST00000175426 93 ntBASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trmt13Q8BYH3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trmt13Q8BYH3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trmt13Q8BYH3 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms