Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm44430-201ENSMUST00000203376 995 ntBASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap1Q8BTW8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap1Q8BTW8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk5rap1Q8BTW8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Gm13312-201ENSMUST00000119631 718 ntBASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Gm12895-201ENSMUST00000122214 226 ntBASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk5rap1Q8BTW8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.61■□□□□ 0.09
Cdk5rap1Q8BTW8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms