Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Gm7291-201ENSMUST00000199147 382 ntBASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Gm6365-201ENSMUST00000054711 744 ntBASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smco3Q8BQM7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smco3Q8BQM7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco3Q8BQM7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco3Q8BQM7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms