Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Gm27646-201ENSMUST00000183989 110 ntBASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col16a1Q8BLX7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Gm15500-202ENSMUST00000071641 1019 ntBASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col16a1Q8BLX7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Gm11873-201ENSMUST00000117877 1304 ntBASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Gm4913-201ENSMUST00000117075 1290 ntBASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col16a1Q8BLX7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col16a1Q8BLX7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Col16a1Q8BLX7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Gm15920-201ENSMUST00000118998 402 ntBASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.53■■□□□ 1.04
Col16a1Q8BLX7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms