Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nop53Q8BK35 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Nop53Q8BK35 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nop53Q8BK35 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.7■□□□□ 0.42
Nop53Q8BK35 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Gm18958-201ENSMUST00000174258 762 ntBASIC17.7■□□□□ 0.42
Nop53Q8BK35 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.7■□□□□ 0.42
Nop53Q8BK35 Gm38027-201ENSMUST00000192315 235 ntBASIC17.7■□□□□ 0.42
Nop53Q8BK35 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop53Q8BK35 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Gm15565-201ENSMUST00000118890 427 ntBASIC17.69■□□□□ 0.42
Nop53Q8BK35 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.69■□□□□ 0.42
Nop53Q8BK35 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop53Q8BK35 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Gm21814-202ENSMUST00000203277 873 ntBASIC17.68■□□□□ 0.42
Nop53Q8BK35 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.68■□□□□ 0.42
Nop53Q8BK35 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Nop53Q8BK35 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nop53Q8BK35 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms