Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Upk3bQ80YF6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Gm18958-201ENSMUST00000174258 762 ntBASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3bQ80YF6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Upk3bQ80YF6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk3bQ80YF6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk3bQ80YF6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms