Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ttc28Q80XJ3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Gm5682-201ENSMUST00000173402 505 ntBASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ttc28Q80XJ3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Mir8117-201ENSMUST00000184773 107 ntBASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm14701-201ENSMUST00000117156 348 ntBASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Gm8655-201ENSMUST00000221159 852 ntBASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.8□□□□□ -0.2
Ttc28Q80XJ3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm43767-201ENSMUST00000198933 381 ntBASIC13.79□□□□□ -0.2
Ttc28Q80XJ3 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms