Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Gm27011-201ENSMUST00000182352 972 ntBASIC16.55■□□□□ 0.24
Usp8Q80U87 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp8Q80U87 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.55■□□□□ 0.24
Usp8Q80U87 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Usp8Q80U87 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Usp8Q80U87 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.55■□□□□ 0.24
Usp8Q80U87 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Usp8Q80U87 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.54■□□□□ 0.24
Usp8Q80U87 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.54■□□□□ 0.24
Usp8Q80U87 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.54■□□□□ 0.24
Usp8Q80U87 Odf3b-204ENSMUST00000227834 930 ntBASIC16.54■□□□□ 0.24
Usp8Q80U87 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Usp8Q80U87 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.54■□□□□ 0.24
Usp8Q80U87 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Usp8Q80U87 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp8Q80U87 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Gm715-201ENSMUST00000117865 831 ntBASIC16.53■□□□□ 0.24
Usp8Q80U87 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.53■□□□□ 0.24
Usp8Q80U87 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Gm22240-201ENSMUST00000175225 82 ntBASIC16.53■□□□□ 0.24
Usp8Q80U87 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.53■□□□□ 0.24
Usp8Q80U87 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Gm10812-201ENSMUST00000099864 546 ntBASIC16.53■□□□□ 0.24
Usp8Q80U87 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Usp8Q80U87 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp8Q80U87 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.52■□□□□ 0.24
Usp8Q80U87 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms