Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh19Q80TF3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh19Q80TF3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh19Q80TF3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.15■□□□□ 0.18
Pcdh19Q80TF3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms