Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Gm5648-201ENSMUST00000122244 1587 ntBASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShprhQ7TPQ3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Gm13597-201ENSMUST00000121239 375 ntBASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShprhQ7TPQ3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Chchd1-203ENSMUST00000224633 557 ntBASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShprhQ7TPQ3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Gm18622-201ENSMUST00000219361 595 ntBASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShprhQ7TPQ3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Mir8117-201ENSMUST00000184773 107 ntBASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ShprhQ7TPQ3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
ShprhQ7TPQ3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Auts2-212ENSMUST00000178555 309 ntBASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Gm10576-201ENSMUST00000191927 825 ntBASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Gm37153-201ENSMUST00000193637 231 ntBASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 AC151286.1-201ENSMUST00000198489 145 ntBASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms