Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sned1Q70E20 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm44335-201ENSMUST00000196879 141 ntBASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm44297-201ENSMUST00000198304 141 ntBASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm44346-201ENSMUST00000198851 141 ntBASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.86■□□□□ 0.77
Sned1Q70E20 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.86■□□□□ 0.77
Sned1Q70E20 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sned1Q70E20 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.85■□□□□ 0.77
Sned1Q70E20 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sned1Q70E20 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.84■□□□□ 0.77
Sned1Q70E20 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sned1Q70E20 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sned1Q70E20 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sned1Q70E20 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sned1Q70E20 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sned1Q70E20 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sned1Q70E20 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sned1Q70E20 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sned1Q70E20 Gm15427-201ENSMUST00000117288 531 ntBASIC19.83■□□□□ 0.76
Sned1Q70E20 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.83■□□□□ 0.76
Sned1Q70E20 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sned1Q70E20 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.83■□□□□ 0.76
Sned1Q70E20 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Sned1Q70E20 Gm45747-201ENSMUST00000212203 999 ntBASIC19.83■□□□□ 0.76
Sned1Q70E20 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.83■□□□□ 0.76
Sned1Q70E20 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sned1Q70E20 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.83■□□□□ 0.76
Sned1Q70E20 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Sned1Q70E20 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.82■□□□□ 0.76
Sned1Q70E20 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sned1Q70E20 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Gm13365-201ENSMUST00000121188 973 ntBASIC19.82■□□□□ 0.76
Sned1Q70E20 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.82■□□□□ 0.76
Sned1Q70E20 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.82■□□□□ 0.76
Sned1Q70E20 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sned1Q70E20 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.82■□□□□ 0.76
Sned1Q70E20 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sned1Q70E20 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms