Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casc1Q6TDU8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gm13836-201ENSMUST00000121159 501 ntBASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gm7889-201ENSMUST00000185591 958 ntBASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gm37025-201ENSMUST00000195159 829 ntBASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casc1Q6TDU8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casc1Q6TDU8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Dancr-204ENSMUST00000132389 2347 ntBASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casc1Q6TDU8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Gm7791-201ENSMUST00000219066 539 ntBASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casc1Q6TDU8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms