Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tra2aQ6PFR5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Gm9727-201ENSMUST00000161387 555 ntBASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tra2aQ6PFR5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tra2aQ6PFR5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Gm12260-201ENSMUST00000122447 411 ntBASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Gm27702-201ENSMUST00000184512 56 ntBASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.02■□□□□ 0.16
Tra2aQ6PFR5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tra2aQ6PFR5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Gm11764-201ENSMUST00000120221 623 ntBASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tra2aQ6PFR5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms