Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.65■□□□□ 0.42
CtifQ6PEE2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm26833-201ENSMUST00000180899 440 ntBASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.65■□□□□ 0.42
CtifQ6PEE2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 BC037039-201ENSMUST00000192003 2205 ntBASIC17.65■□□□□ 0.42
CtifQ6PEE2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CtifQ6PEE2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CtifQ6PEE2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CtifQ6PEE2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CtifQ6PEE2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CtifQ6PEE2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CtifQ6PEE2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.62■□□□□ 0.41
CtifQ6PEE2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Gm42569-201ENSMUST00000200539 472 ntBASIC17.62■□□□□ 0.41
CtifQ6PEE2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CtifQ6PEE2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.61■□□□□ 0.41
CtifQ6PEE2 Gm27405-201ENSMUST00000184201 112 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms