Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc85bQ6PDY0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc85bQ6PDY0 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.14■□□□□ 0.34
Ccdc85bQ6PDY0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc85bQ6PDY0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85bQ6PDY0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85bQ6PDY0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Gm18421-201ENSMUST00000204122 625 ntBASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Chchd1-203ENSMUST00000224633 557 ntBASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc85bQ6PDY0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.11■□□□□ 0.33
Ccdc85bQ6PDY0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms