Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf220Q6PDX6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Asic1-205ENSMUST00000228185 1818 ntBASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf220Q6PDX6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Gm26571-201ENSMUST00000181399 666 ntBASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Gm38285-201ENSMUST00000192928 922 ntBASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Gm7291-201ENSMUST00000199147 382 ntBASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf220Q6PDX6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Gm2399-201ENSMUST00000104944 225 ntBASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf220Q6PDX6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms