Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac4Q6NZM9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac4Q6NZM9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Hdac4Q6NZM9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hdac4Q6NZM9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Hdac4Q6NZM9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hdac4Q6NZM9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Gm9987-201ENSMUST00000069768 567 ntBASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac4Q6NZM9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Gm37722-201ENSMUST00000193757 208 ntBASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac4Q6NZM9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.43■□□□□ 0.54
Hdac4Q6NZM9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms