Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Gm11336-201ENSMUST00000118168 334 ntBASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Gm11355-201ENSMUST00000121120 306 ntBASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zc3h11aQ6NZF1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3h11aQ6NZF1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h11aQ6NZF1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h11aQ6NZF1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3h11aQ6NZF1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Gm44450-201ENSMUST00000199528 114 ntBASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3h11aQ6NZF1 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms