Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm42473-201ENSMUST00000201056 2291 ntBASIC17■□□□□ 0.31
Krt42Q6IFX2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17■□□□□ 0.31
Krt42Q6IFX2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Krt42Q6IFX2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Asic1-205ENSMUST00000228185 1818 ntBASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Gm5408-201ENSMUST00000197998 747 ntBASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt42Q6IFX2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.97■□□□□ 0.31
Krt42Q6IFX2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt42Q6IFX2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.96■□□□□ 0.31
Krt42Q6IFX2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms