Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Six1Q62231 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.93■□□□□ 0.3
Six1Q62231 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.93■□□□□ 0.3
Six1Q62231 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Six1Q62231 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.93■□□□□ 0.3
Six1Q62231 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Six1Q62231 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Six1Q62231 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Six1Q62231 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Six1Q62231 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.92■□□□□ 0.3
Six1Q62231 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.92■□□□□ 0.3
Six1Q62231 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Six1Q62231 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
Six1Q62231 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Six1Q62231 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Six1Q62231 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six1Q62231 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Six1Q62231 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.91■□□□□ 0.3
Six1Q62231 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.91■□□□□ 0.3
Six1Q62231 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.91■□□□□ 0.3
Six1Q62231 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Gm10566-201ENSMUST00000086739 996 ntBASIC16.91■□□□□ 0.3
Six1Q62231 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Six1Q62231 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Six1Q62231 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six1Q62231 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Gm36967-201ENSMUST00000193814 266 ntBASIC16.9■□□□□ 0.3
Six1Q62231 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.9■□□□□ 0.3
Six1Q62231 Gm18421-201ENSMUST00000204122 625 ntBASIC16.9■□□□□ 0.3
Six1Q62231 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.9■□□□□ 0.3
Six1Q62231 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.9■□□□□ 0.3
Six1Q62231 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.9■□□□□ 0.3
Six1Q62231 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Six1Q62231 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six1Q62231 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Six1Q62231 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Six1Q62231 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six1Q62231 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six1Q62231 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six1Q62231 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six1Q62231 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six1Q62231 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six1Q62231 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms