Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.45■□□□□ 0.06
VcanQ62059 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.45■□□□□ 0.06
VcanQ62059 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.45■□□□□ 0.06
VcanQ62059 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.45■□□□□ 0.06
VcanQ62059 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VcanQ62059 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.44■□□□□ 0.06
VcanQ62059 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Gm5682-201ENSMUST00000173402 505 ntBASIC15.44■□□□□ 0.06
VcanQ62059 Gm18421-201ENSMUST00000204122 625 ntBASIC15.44■□□□□ 0.06
VcanQ62059 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.44■□□□□ 0.06
VcanQ62059 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.44■□□□□ 0.06
VcanQ62059 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VcanQ62059 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.44■□□□□ 0.06
VcanQ62059 Gm25857-201ENSMUST00000082788 129 ntBASIC15.44■□□□□ 0.06
VcanQ62059 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.43■□□□□ 0.06
VcanQ62059 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.43■□□□□ 0.06
VcanQ62059 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.43■□□□□ 0.06
VcanQ62059 Gm27437-201ENSMUST00000183429 107 ntBASIC15.43■□□□□ 0.06
VcanQ62059 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
VcanQ62059 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.43■□□□□ 0.06
VcanQ62059 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.43■□□□□ 0.06
VcanQ62059 Gm7653-201ENSMUST00000214567 508 ntBASIC15.43■□□□□ 0.06
VcanQ62059 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VcanQ62059 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Gm44430-201ENSMUST00000203376 995 ntBASIC15.42■□□□□ 0.06
VcanQ62059 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
VcanQ62059 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.42■□□□□ 0.06
VcanQ62059 Gm44492-201ENSMUST00000197012 141 ntBASIC15.42■□□□□ 0.06
VcanQ62059 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.42■□□□□ 0.06
VcanQ62059 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.42■□□□□ 0.06
VcanQ62059 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.42■□□□□ 0.06
VcanQ62059 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VcanQ62059 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VcanQ62059 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
VcanQ62059 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
VcanQ62059 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.41■□□□□ 0.06
VcanQ62059 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.41■□□□□ 0.06
VcanQ62059 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
VcanQ62059 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VcanQ62059 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
VcanQ62059 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VcanQ62059 Gm27646-201ENSMUST00000183989 110 ntBASIC15.41■□□□□ 0.06
VcanQ62059 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.4■□□□□ 0.06
VcanQ62059 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms