Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.66□□□□□ -0.38
Notch3Q61982 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Notch3Q61982 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Notch3Q61982 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.66□□□□□ -0.38
Notch3Q61982 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.66□□□□□ -0.38
Notch3Q61982 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Notch3Q61982 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.66□□□□□ -0.38
Notch3Q61982 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.65□□□□□ -0.38
Notch3Q61982 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.65□□□□□ -0.38
Notch3Q61982 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Notch3Q61982 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Notch3Q61982 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Notch3Q61982 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.65□□□□□ -0.39
Notch3Q61982 Gm37935-201ENSMUST00000192012 982 ntBASIC12.65□□□□□ -0.39
Notch3Q61982 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.65□□□□□ -0.39
Notch3Q61982 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.65□□□□□ -0.39
Notch3Q61982 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Notch3Q61982 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Notch3Q61982 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Notch3Q61982 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Notch3Q61982 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Notch3Q61982 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.64□□□□□ -0.39
Notch3Q61982 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Notch3Q61982 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.64□□□□□ -0.39
Notch3Q61982 Gm28659-201ENSMUST00000188013 759 ntBASIC12.64□□□□□ -0.39
Notch3Q61982 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Notch3Q61982 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.64□□□□□ -0.39
Notch3Q61982 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Notch3Q61982 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.63□□□□□ -0.39
Notch3Q61982 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Notch3Q61982 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.63□□□□□ -0.39
Notch3Q61982 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Notch3Q61982 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Notch3Q61982 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms