Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clcn4Q61418 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Clcn4Q61418 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm38027-201ENSMUST00000192315 235 ntBASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm3375-201ENSMUST00000203929 796 ntBASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm9731-201ENSMUST00000209480 747 ntBASIC15.21■□□□□ 0.03
Clcn4Q61418 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.21■□□□□ 0.03
Clcn4Q61418 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Clcn4Q61418 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcn4Q61418 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.21■□□□□ 0.02
Clcn4Q61418 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.21■□□□□ 0.02
Clcn4Q61418 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcn4Q61418 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.2■□□□□ 0.02
Clcn4Q61418 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcn4Q61418 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Clcn4Q61418 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clcn4Q61418 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.19■□□□□ 0.02
Clcn4Q61418 Gm13559-201ENSMUST00000120476 863 ntBASIC15.19■□□□□ 0.02
Clcn4Q61418 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn4Q61418 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Clcn4Q61418 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms