Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Gm15039-201ENSMUST00000118914 875 ntBASIC18.28■□□□□ 0.52
Ift88Q61371 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.28■□□□□ 0.52
Ift88Q61371 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.28■□□□□ 0.52
Ift88Q61371 Timm23-208ENSMUST00000226683 750 ntBASIC18.28■□□□□ 0.52
Ift88Q61371 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ift88Q61371 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ift88Q61371 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.27■□□□□ 0.52
Ift88Q61371 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.27■□□□□ 0.52
Ift88Q61371 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ift88Q61371 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ift88Q61371 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ift88Q61371 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ift88Q61371 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ift88Q61371 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ift88Q61371 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ift88Q61371 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ift88Q61371 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ift88Q61371 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.26■□□□□ 0.51
Ift88Q61371 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.26■□□□□ 0.51
Ift88Q61371 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ift88Q61371 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.26■□□□□ 0.51
Ift88Q61371 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.26■□□□□ 0.51
Ift88Q61371 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ift88Q61371 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.26■□□□□ 0.51
Ift88Q61371 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ift88Q61371 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.25■□□□□ 0.51
Ift88Q61371 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.25■□□□□ 0.51
Ift88Q61371 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ift88Q61371 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.25■□□□□ 0.51
Ift88Q61371 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.25■□□□□ 0.51
Ift88Q61371 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.25■□□□□ 0.51
Ift88Q61371 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ift88Q61371 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ift88Q61371 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.24■□□□□ 0.51
Ift88Q61371 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.24■□□□□ 0.51
Ift88Q61371 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ift88Q61371 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.24■□□□□ 0.51
Ift88Q61371 Gm10653-202ENSMUST00000139570 835 ntBASIC18.24■□□□□ 0.51
Ift88Q61371 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ift88Q61371 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ift88Q61371 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.24■□□□□ 0.51
Ift88Q61371 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.24■□□□□ 0.51
Ift88Q61371 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Ift88Q61371 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ift88Q61371 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms