Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Irf9Q61179 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Irf9Q61179 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Irf9Q61179 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.49■□□□□ 0.87
Irf9Q61179 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.49■□□□□ 0.87
Irf9Q61179 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.49■□□□□ 0.87
Irf9Q61179 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.49■□□□□ 0.87
Irf9Q61179 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.49■□□□□ 0.87
Irf9Q61179 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf9Q61179 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Irf9Q61179 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.48■□□□□ 0.87
Irf9Q61179 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Irf9Q61179 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.48■□□□□ 0.87
Irf9Q61179 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.48■□□□□ 0.87
Irf9Q61179 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Irf9Q61179 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf9Q61179 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.48■□□□□ 0.87
Irf9Q61179 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Irf9Q61179 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.47■□□□□ 0.87
Irf9Q61179 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Irf9Q61179 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Irf9Q61179 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.47■□□□□ 0.87
Irf9Q61179 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Gm5864-201ENSMUST00000202263 970 ntBASIC20.47■□□□□ 0.87
Irf9Q61179 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf9Q61179 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Irf9Q61179 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Irf9Q61179 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Gm28659-201ENSMUST00000188013 759 ntBASIC20.46■□□□□ 0.87
Irf9Q61179 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.46■□□□□ 0.87
Irf9Q61179 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.46■□□□□ 0.87
Irf9Q61179 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Irf9Q61179 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf9Q61179 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.45■□□□□ 0.86
Irf9Q61179 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.45■□□□□ 0.86
Irf9Q61179 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.45■□□□□ 0.86
Irf9Q61179 Mir8098-201ENSMUST00000184011 137 ntBASIC20.45■□□□□ 0.86
Irf9Q61179 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Irf9Q61179 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.45■□□□□ 0.86
Irf9Q61179 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Irf9Q61179 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Irf9Q61179 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf9Q61179 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Irf9Q61179 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Gm13884-201ENSMUST00000118103 829 ntBASIC20.44■□□□□ 0.86
Irf9Q61179 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.44■□□□□ 0.86
Irf9Q61179 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Irf9Q61179 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Irf9Q61179 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf9Q61179 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms