Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sdf4Q61112 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sdf4Q61112 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.74■□□□□ 0.27
Sdf4Q61112 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sdf4Q61112 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.74■□□□□ 0.27
Sdf4Q61112 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Gm13836-201ENSMUST00000121159 501 ntBASIC16.74■□□□□ 0.27
Sdf4Q61112 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.74■□□□□ 0.27
Sdf4Q61112 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sdf4Q61112 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdf4Q61112 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Gm11355-201ENSMUST00000121120 306 ntBASIC16.73■□□□□ 0.27
Sdf4Q61112 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Gm29707-201ENSMUST00000196325 491 ntBASIC16.73■□□□□ 0.27
Sdf4Q61112 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdf4Q61112 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdf4Q61112 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sdf4Q61112 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sdf4Q61112 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sdf4Q61112 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sdf4Q61112 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sdf4Q61112 Gm18421-201ENSMUST00000204122 625 ntBASIC16.72■□□□□ 0.27
Sdf4Q61112 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.72■□□□□ 0.27
Sdf4Q61112 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdf4Q61112 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Sdf4Q61112 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.71■□□□□ 0.27
Sdf4Q61112 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sdf4Q61112 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sdf4Q61112 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
Sdf4Q61112 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdf4Q61112 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.7■□□□□ 0.26
Sdf4Q61112 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms