Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Scarb1Q61009 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Scarb1Q61009 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scarb1Q61009 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.96□□□□□ -0.17
Scarb1Q61009 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scarb1Q61009 Gm4968-201ENSMUST00000071458 858 ntBASIC13.96□□□□□ -0.17
Scarb1Q61009 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scarb1Q61009 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scarb1Q61009 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scarb1Q61009 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scarb1Q61009 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Scarb1Q61009 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scarb1Q61009 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.96□□□□□ -0.18
Scarb1Q61009 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Scarb1Q61009 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scarb1Q61009 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Gm5408-201ENSMUST00000197998 747 ntBASIC13.95□□□□□ -0.18
Scarb1Q61009 Gm2559-201ENSMUST00000201323 363 ntBASIC13.95□□□□□ -0.18
Scarb1Q61009 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Scarb1Q61009 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scarb1Q61009 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scarb1Q61009 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.94□□□□□ -0.18
Scarb1Q61009 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.94□□□□□ -0.18
Scarb1Q61009 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Scarb1Q61009 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scarb1Q61009 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scarb1Q61009 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.93□□□□□ -0.18
Scarb1Q61009 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scarb1Q61009 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.93□□□□□ -0.18
Scarb1Q61009 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scarb1Q61009 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.93□□□□□ -0.18
Scarb1Q61009 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Scarb1Q61009 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.93□□□□□ -0.18
Scarb1Q61009 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scarb1Q61009 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scarb1Q61009 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms