Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Prdm1Q60636 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Prdm1Q60636 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.28■□□□□ 0.68
Prdm1Q60636 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Prdm1Q60636 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.28■□□□□ 0.68
Prdm1Q60636 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.28■□□□□ 0.68
Prdm1Q60636 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm1Q60636 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.28■□□□□ 0.68
Prdm1Q60636 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prdm1Q60636 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.27■□□□□ 0.68
Prdm1Q60636 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Prdm1Q60636 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prdm1Q60636 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm1Q60636 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prdm1Q60636 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Gm33142-201ENSMUST00000193913 867 ntBASIC19.26■□□□□ 0.67
Prdm1Q60636 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm1Q60636 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prdm1Q60636 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm1Q60636 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Prdm1Q60636 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.24■□□□□ 0.67
Prdm1Q60636 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.24■□□□□ 0.67
Prdm1Q60636 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Gm7284-201ENSMUST00000131667 944 ntBASIC19.24■□□□□ 0.67
Prdm1Q60636 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.24■□□□□ 0.67
Prdm1Q60636 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.24■□□□□ 0.67
Prdm1Q60636 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Prdm1Q60636 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm1Q60636 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms