Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.22□□□□□ -0.61
Trav3-1Q5R1I8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Trav3-1Q5R1I8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-1Q5R1I8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms