Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Gm27357-201ENSMUST00000183754 135 ntBASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-4Q5R1I0 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gm18669-201ENSMUST00000216049 778 ntBASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-4Q5R1I0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-4Q5R1I0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Gm10052-201ENSMUST00000168019 960 ntBASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Gm7729-201ENSMUST00000050143 801 ntBASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-4Q5R1I0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms