Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Gm2399-201ENSMUST00000104944 225 ntBASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Gm43017-201ENSMUST00000198296 752 ntBASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Gm42778-201ENSMUST00000199644 553 ntBASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-4Q5R1H9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-4Q5R1H9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms