Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gm21814-202ENSMUST00000203277 873 ntBASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-3Q5R1E6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Gm18115-201ENSMUST00000221209 621 ntBASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-3Q5R1E6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-3Q5R1E6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms