Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav8d-2Q5R1B6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8d-2Q5R1B6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Mir3113-201ENSMUST00000175478 76 ntBASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Mir8117-201ENSMUST00000184773 107 ntBASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8d-2Q5R1B6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm10175-201ENSMUST00000086013 645 ntBASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8d-2Q5R1B6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm25911-201ENSMUST00000157621 56 ntBASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Auts2-212ENSMUST00000178555 309 ntBASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8d-2Q5R1B6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Gm15920-201ENSMUST00000118998 402 ntBASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8d-2Q5R1B6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8d-2Q5R1B6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8d-2Q5R1B6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8d-2Q5R1B6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8d-2Q5R1B6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8d-2Q5R1B6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms