Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.64■□□□□ 0.74
Rnf20Q5DTM8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Gm11336-201ENSMUST00000118168 334 ntBASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf20Q5DTM8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf20Q5DTM8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf20Q5DTM8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms