Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Gm43347-201ENSMUST00000200226 580 ntBASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rc3h1Q4VGL6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rc3h1Q4VGL6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rc3h1Q4VGL6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rc3h1Q4VGL6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rc3h1Q4VGL6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rc3h1Q4VGL6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Rprl3-201ENSMUST00000157400 290 ntBASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 AC108846.1-201ENSMUST00000214531 513 ntBASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Gm45244-201ENSMUST00000211328 2200 ntBASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rc3h1Q4VGL6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
Rc3h1Q4VGL6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Gm44454-201ENSMUST00000198541 138 ntBASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Gm5864-201ENSMUST00000202263 970 ntBASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h1Q4VGL6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms