Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.51■□□□□ 0.39
Syne3Q4FZC9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syne3Q4FZC9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syne3Q4FZC9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Gm10231-201ENSMUST00000181584 441 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Gm10175-202ENSMUST00000208752 441 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Gm7213-201ENSMUST00000215977 950 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.49■□□□□ 0.39
Syne3Q4FZC9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syne3Q4FZC9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne3Q4FZC9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms