Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prpf38aQ4FK66 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Gm12644-201ENSMUST00000119935 606 ntBASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38aQ4FK66 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm28659-201ENSMUST00000188013 759 ntBASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm5864-201ENSMUST00000202263 970 ntBASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.19■□□□□ 0.66
Prpf38aQ4FK66 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Gm15165-201ENSMUST00000118140 502 ntBASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Gm27867-201ENSMUST00000184778 125 ntBASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38aQ4FK66 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms