Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Gm27300-201ENSMUST00000184085 97 ntBASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Gm27335-201ENSMUST00000184758 97 ntBASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.48■□□□□ 0.87
Shank3Q4ACU6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Shank3Q4ACU6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank3Q4ACU6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Gm17968-201ENSMUST00000194902 784 ntBASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shank3Q4ACU6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank3Q4ACU6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Gm14701-201ENSMUST00000117156 348 ntBASIC20.44■□□□□ 0.86
Shank3Q4ACU6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Shank3Q4ACU6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank3Q4ACU6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Gm27321-201ENSMUST00000185021 205 ntBASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Gm37153-201ENSMUST00000193637 231 ntBASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms