Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mir1199-201ENSMUST00000117015 119 ntBASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21■□□□□ 0.95
Ccdc27Q3V036 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc27Q3V036 AC153881.1-201ENSMUST00000214448 284 ntBASIC21■□□□□ 0.95
Ccdc27Q3V036 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccdc27Q3V036 AC093043.3-201ENSMUST00000226531 2273 ntBASIC21■□□□□ 0.95
Ccdc27Q3V036 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ccdc27Q3V036 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccdc27Q3V036 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc27Q3V036 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Gm22240-201ENSMUST00000175225 82 ntBASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc27Q3V036 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc27Q3V036 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Gm38027-201ENSMUST00000192315 235 ntBASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc27Q3V036 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ccdc27Q3V036 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms