Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1brtQ3UNC9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Gm29791-202ENSMUST00000207888 369 ntBASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1brtQ3UNC9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Mir8112-201ENSMUST00000184382 131 ntBASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1brtQ3UNC9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1brtQ3UNC9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms