Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smcr8Q3UMB5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smcr8Q3UMB5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smcr8Q3UMB5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Smcr8Q3UMB5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.71■□□□□ 0.42
Smcr8Q3UMB5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Smcr8Q3UMB5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smcr8Q3UMB5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smcr8Q3UMB5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smcr8Q3UMB5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smcr8Q3UMB5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms