Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg11Q3UHA3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spg11Q3UHA3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gm18062-201ENSMUST00000208020 547 ntBASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gm18055-201ENSMUST00000208254 547 ntBASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gm9899-201ENSMUST00000065519 555 ntBASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Mir7085-201ENSMUST00000184353 66 ntBASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Spg11Q3UHA3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Spg11Q3UHA3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms