Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Gm11025-201ENSMUST00000140773 466 ntBASIC19.52■□□□□ 0.72
Col5a2Q3U962 Gm27321-201ENSMUST00000185021 205 ntBASIC19.52■□□□□ 0.72
Col5a2Q3U962 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.52■□□□□ 0.72
Col5a2Q3U962 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col5a2Q3U962 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.51■□□□□ 0.71
Col5a2Q3U962 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.51■□□□□ 0.71
Col5a2Q3U962 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col5a2Q3U962 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col5a2Q3U962 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col5a2Q3U962 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.5■□□□□ 0.71
Col5a2Q3U962 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Mir6956-201ENSMUST00000183598 62 ntBASIC19.49■□□□□ 0.71
Col5a2Q3U962 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.49■□□□□ 0.71
Col5a2Q3U962 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.49■□□□□ 0.71
Col5a2Q3U962 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col5a2Q3U962 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm36967-201ENSMUST00000193814 266 ntBASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col5a2Q3U962 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col5a2Q3U962 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Gm27300-201ENSMUST00000184085 97 ntBASIC19.46■□□□□ 0.71
Col5a2Q3U962 Gm27335-201ENSMUST00000184758 97 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms