Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Gm10812-201ENSMUST00000099864 546 ntBASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fndc4Q3TR08 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.09□□□□□ -0.15
Fndc4Q3TR08 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fndc4Q3TR08 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fndc4Q3TR08 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fndc4Q3TR08 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fndc4Q3TR08 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.08□□□□□ -0.15
Fndc4Q3TR08 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Gm4974-201ENSMUST00000209974 875 ntBASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fndc4Q3TR08 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Gm10517-202ENSMUST00000192970 758 ntBASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fndc4Q3TR08 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fndc4Q3TR08 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms