Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cul4aQ3TCH7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Gm18115-201ENSMUST00000221209 621 ntBASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cul4aQ3TCH7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Mir5122-201ENSMUST00000175004 89 ntBASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cul4aQ3TCH7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cul4aQ3TCH7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms