Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.22■□□□□ 0.03
Col10a1Q05306 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col10a1Q05306 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.21■□□□□ 0.03
Col10a1Q05306 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.21■□□□□ 0.03
Col10a1Q05306 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.21■□□□□ 0.03
Col10a1Q05306 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col10a1Q05306 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col10a1Q05306 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Col10a1Q05306 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.21■□□□□ 0.02
Col10a1Q05306 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.21■□□□□ 0.02
Col10a1Q05306 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col10a1Q05306 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.2■□□□□ 0.02
Col10a1Q05306 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Gm9013-201ENSMUST00000132939 882 ntBASIC15.2■□□□□ 0.02
Col10a1Q05306 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Col10a1Q05306 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col10a1Q05306 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col10a1Q05306 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Col10a1Q05306 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Col10a1Q05306 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.2■□□□□ 0.02
Col10a1Q05306 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col10a1Q05306 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col10a1Q05306 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col10a1Q05306 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col10a1Q05306 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 AA414768-201ENSMUST00000121924 1257 ntBASIC15.19■□□□□ 0.02
Col10a1Q05306 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col10a1Q05306 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col10a1Q05306 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col10a1Q05306 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.18■□□□□ 0.02
Col10a1Q05306 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm7977-201ENSMUST00000193787 748 ntBASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm5587-201ENSMUST00000206270 674 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms