Protein–RNA interactions for Protein: P97368

Meis3, Homeobox protein Meis3, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Meis3P97368 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Meis3P97368 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Meis3P97368 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Meis3P97368 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Meis3P97368 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Meis3P97368 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Meis3P97368 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Meis3P97368 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Meis3P97368 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.65■□□□□ 0.42
Meis3P97368 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Meis3P97368 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Meis3P97368 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Meis3P97368 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Meis3P97368 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Meis3P97368 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Meis3P97368 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Meis3P97368 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Meis3P97368 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.64■□□□□ 0.41
Meis3P97368 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Meis3P97368 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Meis3P97368 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.64■□□□□ 0.41
Meis3P97368 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.64■□□□□ 0.41
Meis3P97368 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Meis3P97368 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.64■□□□□ 0.41
Meis3P97368 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Meis3P97368 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Meis3P97368 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Meis3P97368 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Meis3P97368 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Meis3P97368 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.62■□□□□ 0.41
Meis3P97368 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.62■□□□□ 0.41
Meis3P97368 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Meis3P97368 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.62■□□□□ 0.41
Meis3P97368 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.62■□□□□ 0.41
Meis3P97368 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Meis3P97368 Prob1-201ENSMUST00000097619 3021 ntBASIC17.61■□□□□ 0.41
Meis3P97368 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Meis3P97368 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.61■□□□□ 0.41
Meis3P97368 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.61■□□□□ 0.41
Meis3P97368 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Meis3P97368 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Meis3P97368 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms